Experimental model for myelodysplastic syndromes uncovers genetic alterations to improve characterization microbiologystudy

Scientists identify genetic alterations in first experimental model for myelodysplastic syndromes
Overview of the genomic alterations detected by the multi-techniqueapproach. A) G banding and M-FISH of the two karyotypically distinct cellpopulations. B)Circosplot summarizing all the genomic alterations detected by the combination ofdifferent techniques. Rings are as follows (from outer to inner): chromosomecytobands, ROH regions (yellow), aneuploidies and CNV (gains in blue and lossesin red, alterations smaller than 500 kilobases are shown as dots), intra- andinterchromosomic translocations (green for those detected only by M-FISH, andblue for those detected by both OGM and M-FISH). C) UpSet plot illustrating thenumber of alterations detected exclusively by each technique, as well as thenumber of alterations simultaneously detected by multiple techniques. Credit: Molecular Cytogenetics (2025). DOI: 10.1186/s13039-025-00714-7

Myelodysplastic syndromes (MDS) are a group of disorders that typically arise in adulthood, especially after the age of 70, and their five-year survival rate is around 30%. MDS are characterized by defective maturation of blood cells in the bone marrow, leading to a range of health problems such as fatigue and recurrent infections. Without appropriate treatment, they may progress to acute myeloid leukemia, a much more severe disease.

Current mainstay treatments for MDS include various types of chemotherapy, hypomethylating agents, and the option of undergoing a bone marrow transplant. However, the lack of a robust experimental model for laboratory research has slowed the development of novel therapeutic tools. For this reason, the MDS-L cell line—derived from a 52-year-old patient—represents a unique opportunity to study the disease in greater depth.

In a study recently published in the journal Molecular Cytogenetics, a team led by Dr. Francesc Solé, with Júlia Mestre as first author, has detailed the genetic and cytogenetic characteristics of the MDS-L line using state-of-the-art tools. Their analysis uncovered 9 chromosomal alterations and 39 novel genetic changes, which contribute to a better understanding of the disease and may reveal potential therapeutic vulnerabilities.

“This detailed genomic characterization significantly enhances the utility of the MDS-L cell line, as it provides a clear understanding of clonal architecture and genetic complexity,” explains Mestre. She adds, “This is of particular interest when selecting experimental contexts and appropriate conditions to improve the interpretation of results.”

Specifically, the use of Optical Genome Mapping (OGM) technology has been key to accurately describing chromosomal abnormalities in the MDS-L line. OGM has detected both small alterations and large-scale chromosomal rearrangements, demonstrating it is a useful diagnostic tool for MDS in clinical practice.

Regarding the MDS-L line, the study’s authors highlight that its new characterization validates it as a robust in vitro model for the study of MDS, as it has several disease-characteristic alterations and can therefore appropriately simulate the disease’s response when exposed to potential drugs. This may accelerate the search for new medicines for future clinical application.

More information:
Julia Mestre et al, Integrated cytogenetic and genomic profiling of the MDS-L cell line, Molecular Cytogenetics (2025). DOI: 10.1186/s13039-025-00714-7

Provided by
Josep Carreras Leukaemia Research Institute


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Experimental model for myelodysplastic syndromes uncovers genetic alterations to improve characterization (2025, June 13)
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